主要研究领域：
1）数字流域
2）水信息系统
代表性研究项目：
2010.05-2010.10国务院南水北调办公室项目-南水北调工程水源地及沿线水质信息系统研制与开发
2009.10-2011.10泉州市水利局项目-泉州市数字流域平台开发研究
2009.01-2011.12”十一五”水专项专题-饮用水源地综合管理技术研究与集成
2008.10-2010.12全球环境基金项目-县级SWAT模型开发及北京市KM系统建立
2008.09-2010.12 "十一五”水专项专题-重点流域水生态功能分区信息管理与技术集成研究
2006.12-2007.10大兴区域开发活动环境管理决策支持系统研究
2006.08-2007.07全球环境基金项目-通州区水资源水环境综合管理规划
2005.12-2006.10通州区域开发活动环境管理决策支持系统研究
2005.05-2005.08 "十一五"时期海淀区环境保护与生态建设规划
2005.04-2005.10广州市南沙开发区工业企业三维仿真环境监测显示系统研究
2004.10-2005.05广州南沙环境保护GIS电子管理系统研究
2003.09-2004.03厦门市乡镇（大嶝，莲花，新圩）环境规划研究
2003.03-2004.03宁波市生态城市规划研究
2002.12-2003.04厦门市生态城市概念性规划研究
2002.03-2002.12黄河流域水资源水环境数据信息共享平台研究
2002.03-2002.08广州市南部拓展区环保规划
2001.08-2002.08广州市项目 广州城市生态可持续发展规划
2002.03-2002.12回国启动基金项目 声纳系统软件的国产化研究
2000.04-2001.04回国启动基金项目 北京动物园的富营养化机制研究
2000.01-2000.12中日国际合作项目 潜水机器人搭载数码相影像合成软件开发
1996.12-1998.12日美合作项目声纳系列软件的开发与应用
1992.04-1995.03东京湾的生态系统模型研究
1990.04-1992.03东京湾的营养盐收支与循环研究
代表性论文：
[1] Wang Guoqiang, Yu Jingshan(Corresponding author). Continuous Modeling of Infiltration Rate for the Management of Sprinkler Irrigation. J. Fac. Agr., Kyushu Univ., 56(1)157-161(2011)
[2] Wang Guoqiang, Baolin Xue, Yu Jingshan(Corresponding author) and Kyoichi Otsuki. Estimating the Agricultural Water Productivity of the Yellow River Basin Based on Remote Sensing Data. J. Fac. Agr., Kyushu Univ., 56(1), 149-156(2011)
[3] Shaowei Wang, Qi Tang, Xinyi Xu, Jingshan Yu. A Study on Eco-hydrology Regionalization and its Application, Environmental Pollution and Public Health (EPPH2010)
[4] Guoqiang Wang, Jingshan Yu, Sangam Threstha, Hiroshi Ishidaira, Anthony Kiem, Kuniyoshi Takeuchi. Application of a distributed erosion model for the assessment of spatial erosion patterns in the Lushi catchment, China. Environmental Earth Sciences, 2010. 61(4), 787-797
[5] Yingxia Li, Ruzhi Qiu, Zhifeng Yang, Chunhui Li, Jingshan Yu. Parameter Determination to Calculate Water Environmental Capacity in Zhangweinan Canal Sub-basin in China. Journal of Environmental Sciences 2010, 22(6), 904-907
[6] 李占杰，鱼京善 黄河流域降水要素的周期特征分析，北京师范大学学报(自然科学版), 2010, 46(3), 401-405
[7] Wang Shaowei, Yu Jingshan(Corresponding author), Xu Xinyi. Development of a Tool for the Application of County-level SWAT Model in Beijing. 2010. River basin research and planning approach: 436-442
[8] Bi Xiaoxue, Yu Jingshan(Corresponding author), Li Qianxiang. The Influence of Adjusting Agricultural Management Mode on the Regional ET. 2010. River basin research and planning approach: 209-214
[9] Yang Yan, Wang Guoqiang, Yu Jingshan. Groundwater Depth Simulation Based on Beijing County-level SWAT Application Tool. 2010. River basin research and planning approach: 309-317
[10] Xue Xiangshan, Li Zhanjie, Yu Jingshan(Corresponding author). Analysis and Indication of Questionnaire Survey on County-level IWEMP of Beijing. 2010. River basin research and planning approach: 165-170
[11] Hu Mingang, Guo Yunhui, Yu Jingshan(Corresponding author). Establishment and Application of One-Dimensional Model for Water Quality Simulation in Medium/small Scale Rivers. 2010. River basin research and planning approach: 429-435
[12] Li Qianxiang, Yu Jingshan. Analysis on Change in Beijing Tongzhou District. 2010. River basin research and planning approach: 226-230
[13] 蔡燕，鱼京善，王会肖，郭云慧 黄河流域生态水文分区，生态学报，2010,30（15），4213-4220
[14] Guoqiang Wang, Baolin Xue, Jingshan Yu and Kyoichi Otsuki. A GIS-based Linear Programming Model for Optimizing Agricultural Land Leveling. 2010. J. Fac. Agr. ,Kyushu University, 55(1),131-135, 2010
[15] Cai Yan, Wang Huixiao, Zhan Chesheng, Yu Jingshan, Guo Yunhui Quantitative analysis of ecological protection objectives in the Yellow River basin. IAHS Publication Red Book, 2009, (330):90-97
[16] 郭云慧，李红华，鱼京善（通讯作者），北京市通州区水环境规划方案下的水质模拟研究，北京师范大学学报(自然科学版), 2009, 45, 5/6, 654-657
[17] Yu Jingshan, Bi Xiaoxue, Li Qianxiang. The Forecasting of ET based on Artificial Neural Network - A Case Study in Tongzhou District of Beijing. 2009. River basin research and planning approach: 396-403
[18] Jingshan Yu. Population and economic growth. Asian- Pacific Coasts and Their Management. 2007, Springer, Netherlands，31－37
[19] C.H. Li ?, Z.F. Yang X.K. Zheng, H.H. Li, Y.X. Li, J.S. Yu. Integrated Water Resources and Water Environment Management in Zhangweinan Canal Subbasin, China. Special Symposium on Water Resource Management and Planning for 21st Century in the 6th International Conference on Environmental Informatics 2007. November 21-23, 2007，Bangkok, Thailand
[20] 徐琳瑜，杨志峰，帅磊，鱼京善，刘世梁，基于生态服务功能价值的水库工程生态补偿研究，中国人口资源与环境，2006,16,4,125-128
[21] 毛显强，鱼京善，郭秀锐，杨志峰，何孟常，吴乾钊，陈思宁，生态活度生态位—理论,、方法及其应用,中国人口资源与环境, 2005, 15,5, 121-125
[22] 鱼京善，王国强，刘昌明.基于GIS系统和最大熵谱原理的降水周期分析方法，气象科学, 2004, 24, 3, 277-284
[23] 鱼京善，崔国庆.北京动物园水体水华发生的生态学机理，环境工程, 2004, 22, 4, 62-65
[24] 鱼京善，成二丽.侧扫声纳在海洋环境监测和保护中的应用,海洋测绘, 2004, 24, 2, 63-66
[25] 邱凉，鱼京善，秦树林.风能资源评估系统开发与应用,能源环境保护, 2004, 18, 2, 33-35
[26] 张贵祥，杨志峰，鱼京善.谈广州市生态可持续发展重点与策略,城市规划汇刊, 2003, 1, 86-90
[27] Jingshan Yu. Redevelopment Plan of Guangzhou City，The 5th International Conference on the Environmental Management of Enclosed Coastal Seas，2001，Kobe, Japan
[28] Riki Sato, Jingshan Yu, Yuji Tanaka and Takashi Ishimaru. New apparatuses for cultivation of appendicularians. Plankton Biology and Ecology, 1999, 46, 2, 162-164
[29] Jingshan Yu, Takashi Ishimaru, Yoshio Koike, Yuji Mine and Yoshihiro Kurita. Seasonal variation of nutrient concentration in Tokyo Bay. Journal of Tokyo University of Fisheries,1995, 82, 1, 33-44
[30] Jingshan Yu，Takashi Ishimaru, Masaaki Murano and Akira Otruki. Some improvements in the salicylate-dichloroisocyanurate method for determining ammonia in seawater. 1994. Lar mer, 32, 119-122
专著：
杨志峰、何孟常、毛显强、鱼京善、吴乾钊.生态城市可持续发展规划，科学出版社, 2004年
发明专利
一种侧扫声纳数据采集处理系统及其方法，专利证书号：第415001号，专利号：ZL 03 1 37106.X,专利权人：北京师范大学，发明人：鱼京善；成二丽；祝贺，授权公告日：2008年7月30日